STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aocu_11670Glycosyl hydrolase, family 88. (381 aa)    
Predicted Functional Partners:
Aocu_11550
Pectine lyase; Belongs to the glycosyl hydrolase 28 family.
     0.979
Aocu_11640
Pectin lyase.
     0.963
Aocu_02140
Pectine lyase with bacterial Ig-like domain.
 
     0.790
Aocu_11500
Xylose isomerase domain-containing protein.
 
    0.787
Aocu_07070
GDSL-like Lipase/Acylhydrolase family.
 
    0.783
Aocu_11660
Pectin lyase.
 
     0.750
Aocu_11680
Pectin lyase.
  
     0.631
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
   
 0.548
Aocu_06610
Alpha/beta hydrolase family protein.
 
     0.519
norM
MATE efflux family protein NorM.
 
     0.505
Your Current Organism:
Acholeplasma oculi
NCBI taxonomy Id: 35623
Other names: A. oculi, ATCC 27350, Acholeplasma oculusi, NCTC 10150
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