STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aocu_11720ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (369 aa)    
Predicted Functional Partners:
ugpE
Putative Glycerol-3-phosphate/Glycerol-2-phosphate ABC transporter, permease protein UgpE.
 
 0.992
ugpA
Putative Glycerol-3-phosphate/Glycerol-2-phosphate ABC transporter, permease protein UgpA.
 
 0.957
Aocu_03880
ABC transporter, binding and permease component.
 
 0.956
ugpB
Arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein; Putative Glycerol-3-phosphate/Glycerol-2-phosphate ABC transporter, substrate binding periplasmic protein UgpB.
  
 0.950
Aocu_03870
Putative ABC transporter, periplasmatic-binding protein.
  
 0.906
Aocu_10840
ABC transporter, ATP-binding protein.
     
0.900
oppD1
Oligopeptide ABC transport system, ATP-binding protein OppD.
 
     
0.899
Aocu_02440
ABC transporter, ATP-binding protein.
 
    
0.898
Aocu_08170
ABC transporter, ATP-binding protein.
 
     
0.870
Aocu_03890
ABC transporter, binding and permease component.
 
 
 0.863
Your Current Organism:
Acholeplasma oculi
NCBI taxonomy Id: 35623
Other names: A. oculi, ATCC 27350, Acholeplasma oculusi, NCTC 10150
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