STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV96343.1Bacteriophytochrome (light-regulated signal transduction histidine kinase). (730 aa)    
Predicted Functional Partners:
SEW25974.1
Signal transduction histidine kinase.
 
 
0.997
SEW02311.1
Signal transduction histidine kinase.
 
0.976
SEW48209.1
Signal transduction histidine kinase.
 
 
 0.976
SEV96368.1
Heme oxygenase.
 
   
 0.944
SEW15197.1
PAS domain S-box-containing protein.
 
  
0.774
SEW49344.1
Signal transduction histidine kinase.
  
 
 0.708
SEW47531.1
Signal transduction histidine kinase.
  
 
 0.704
SEW09455.1
Signal transduction histidine kinase.
  
 
 0.698
SEV88634.1
Signal transduction histidine kinase.
  
 
 0.671
SEW03878.1
Hypothetical protein.
   
 0.646
Your Current Organism:
Chryseobacterium wanjuense
NCBI taxonomy Id: 356305
Other names: C. wanjuense, Chryseobacterium wanjuense Weon et al. 2006 emend. Montero-Calasanz et al. 2013, DSM 17724, KACC 11468, strain R2A10-2
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.