Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEV97093.1 | SEV98177.1 | SAMN05421841_0423 | SAMN05421841_0472 | Cystathionine gamma-lyase. | Cystathionine beta-synthase. | 0.983 |
SEV97093.1 | SEW14313.1 | SAMN05421841_0423 | SAMN05421841_1245 | Cystathionine gamma-lyase. | Cystathionine beta-synthase. | 0.983 |
SEV97093.1 | SEW32199.1 | SAMN05421841_0423 | SAMN05421841_2275 | Cystathionine gamma-lyase. | Methionine-gamma-lyase. | 0.925 |
SEV97093.1 | SEW39146.1 | SAMN05421841_0423 | SAMN05421841_2556 | Cystathionine gamma-lyase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.924 |
SEV97093.1 | SEW39162.1 | SAMN05421841_0423 | SAMN05421841_2558 | Cystathionine gamma-lyase. | 5-methyltetrahydrofolate--homocysteine methyltransferase. | 0.942 |
SEV97093.1 | SEW39173.1 | SAMN05421841_0423 | SAMN05421841_2560 | Cystathionine gamma-lyase. | Homoserine dehydrogenase. | 0.976 |
SEV97093.1 | SEW42456.1 | SAMN05421841_0423 | SAMN05421841_2954 | Cystathionine gamma-lyase. | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | 0.927 |
SEV97093.1 | ahcY | SAMN05421841_0423 | SAMN05421841_0576 | Cystathionine gamma-lyase. | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.922 |
SEV97093.1 | metE | SAMN05421841_0423 | SAMN05421841_1104 | Cystathionine gamma-lyase. | Methionine synthase (B12-independent); Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.957 |
SEV97093.1 | metG | SAMN05421841_0423 | SAMN05421841_2098 | Cystathionine gamma-lyase. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.923 |
SEV98177.1 | SEV97093.1 | SAMN05421841_0472 | SAMN05421841_0423 | Cystathionine beta-synthase. | Cystathionine gamma-lyase. | 0.983 |
SEV98177.1 | SEW14313.1 | SAMN05421841_0472 | SAMN05421841_1245 | Cystathionine beta-synthase. | Cystathionine beta-synthase. | 0.911 |
SEV98177.1 | SEW32199.1 | SAMN05421841_0472 | SAMN05421841_2275 | Cystathionine beta-synthase. | Methionine-gamma-lyase. | 0.847 |
SEV98177.1 | SEW39146.1 | SAMN05421841_0472 | SAMN05421841_2556 | Cystathionine beta-synthase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.916 |
SEV98177.1 | SEW39162.1 | SAMN05421841_0472 | SAMN05421841_2558 | Cystathionine beta-synthase. | 5-methyltetrahydrofolate--homocysteine methyltransferase. | 0.921 |
SEV98177.1 | SEW39173.1 | SAMN05421841_0472 | SAMN05421841_2560 | Cystathionine beta-synthase. | Homoserine dehydrogenase. | 0.943 |
SEV98177.1 | SEW42456.1 | SAMN05421841_0472 | SAMN05421841_2954 | Cystathionine beta-synthase. | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | 0.438 |
SEV98177.1 | ahcY | SAMN05421841_0472 | SAMN05421841_0576 | Cystathionine beta-synthase. | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.943 |
SEV98177.1 | metE | SAMN05421841_0472 | SAMN05421841_1104 | Cystathionine beta-synthase. | Methionine synthase (B12-independent); Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.919 |
SEW14313.1 | SEV97093.1 | SAMN05421841_1245 | SAMN05421841_0423 | Cystathionine beta-synthase. | Cystathionine gamma-lyase. | 0.983 |
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