STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW02136.1Hypothetical protein. (358 aa)    
Predicted Functional Partners:
SEW31677.1
Threonine/homoserine efflux transporter RhtA.
  
     0.597
SEW31119.1
HmuY protein.
  
     0.572
SEW13194.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.497
SEW31155.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.496
SEW19085.1
Polysaccharide deacetylase.
  
     0.445
SEW40983.1
Methyltransferase domain-containing protein.
  
     0.445
SEW02155.1
Hypothetical protein.
 
    
0.434
SEW31131.1
Outer membrane receptor for ferrienterochelin and colicins.
  
     0.431
SEW47684.1
Hypothetical protein.
  
     0.422
Your Current Organism:
Chryseobacterium wanjuense
NCBI taxonomy Id: 356305
Other names: C. wanjuense, Chryseobacterium wanjuense Weon et al. 2006 emend. Montero-Calasanz et al. 2013, DSM 17724, KACC 11468, strain R2A10-2
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