STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW25468.1Hypothetical protein. (137 aa)    
Predicted Functional Partners:
SEW25486.1
Bacteroides conjugative transposon TraK protein.
       0.786
SEW25432.1
Bacteroides conjugative transposon TraM protein.
       0.708
SEW25451.1
Hypothetical protein.
       0.693
SEW25412.1
Bacteroides conjugative transposon TraN protein.
       0.580
SEW25522.1
Protein of unknown function.
       0.556
SEW25394.1
Conjugative transposon protein TraO; Manually curated.
       0.539
SEW25505.1
Bacteroides conjugative transposon TraJ protein.
       0.534
SEW25373.1
Protein of unknown function.
       0.508
SEW25559.1
Protein of unknown function.
       0.443
SEW25543.1
Bacteroides conjugation system ATPase, TraG family.
       0.428
Your Current Organism:
Chryseobacterium wanjuense
NCBI taxonomy Id: 356305
Other names: C. wanjuense, Chryseobacterium wanjuense Weon et al. 2006 emend. Montero-Calasanz et al. 2013, DSM 17724, KACC 11468, strain R2A10-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.