STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW29943.1Protein of unknown function. (312 aa)    
Predicted Functional Partners:
SEV93618.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
 
 0.574
SEV99396.1
RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.574
SEW03992.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
 
 0.574
SEW04569.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
 
 0.574
SEW07923.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
 
 0.574
SEW08801.1
RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.574
SEW13028.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
 
 0.574
SEW24558.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
 
 0.574
SEW24937.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
 
 0.574
SEW24978.1
RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.574
Your Current Organism:
Chryseobacterium wanjuense
NCBI taxonomy Id: 356305
Other names: C. wanjuense, Chryseobacterium wanjuense Weon et al. 2006 emend. Montero-Calasanz et al. 2013, DSM 17724, KACC 11468, strain R2A10-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.