Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEW14200.1 | SEW32524.1 | SAMN05421841_1240 | SAMN05421841_2305 | F-type H+-transporting ATPase subunit epsilon. | ABC-2 type transport system ATP-binding protein. | 0.661 |
SEW14200.1 | atpA | SAMN05421841_1240 | SAMN05421841_1165 | F-type H+-transporting ATPase subunit epsilon. | F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.999 |
SEW14200.1 | atpD | SAMN05421841_1240 | SAMN05421841_1239 | F-type H+-transporting ATPase subunit epsilon. | F-type H+-transporting ATPase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.999 |
SEW14200.1 | atpG | SAMN05421841_1240 | SAMN05421841_1166 | F-type H+-transporting ATPase subunit epsilon. | F-type H+-transporting ATPase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.999 |
SEW15335.1 | SEW32524.1 | SAMN05421841_1294 | SAMN05421841_2305 | phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein. | ABC-2 type transport system ATP-binding protein. | 0.930 |
SEW31368.1 | SEW32524.1 | SAMN05421841_2207 | SAMN05421841_2305 | Protein involved in gliding motility GldF. | ABC-2 type transport system ATP-binding protein. | 0.883 |
SEW32524.1 | SEW14200.1 | SAMN05421841_2305 | SAMN05421841_1240 | ABC-2 type transport system ATP-binding protein. | F-type H+-transporting ATPase subunit epsilon. | 0.661 |
SEW32524.1 | SEW15335.1 | SAMN05421841_2305 | SAMN05421841_1294 | ABC-2 type transport system ATP-binding protein. | phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein. | 0.930 |
SEW32524.1 | SEW31368.1 | SAMN05421841_2305 | SAMN05421841_2207 | ABC-2 type transport system ATP-binding protein. | Protein involved in gliding motility GldF. | 0.883 |
SEW32524.1 | SEW32531.1 | SAMN05421841_2305 | SAMN05421841_2306 | ABC-2 type transport system ATP-binding protein. | ABC-type transport system involved in multi-copper enzyme maturation, permease component. | 0.993 |
SEW32524.1 | SEW32540.1 | SAMN05421841_2305 | SAMN05421841_2307 | ABC-2 type transport system ATP-binding protein. | Hypothetical protein. | 0.675 |
SEW32524.1 | SEW32548.1 | SAMN05421841_2305 | SAMN05421841_2308 | ABC-2 type transport system ATP-binding protein. | Hypothetical protein. | 0.675 |
SEW32524.1 | SEW45752.1 | SAMN05421841_2305 | SAMN05421841_3374 | ABC-2 type transport system ATP-binding protein. | ABC-2 type transport system permease protein. | 0.639 |
SEW32524.1 | atpA | SAMN05421841_2305 | SAMN05421841_1165 | ABC-2 type transport system ATP-binding protein. | F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.787 |
SEW32524.1 | atpD | SAMN05421841_2305 | SAMN05421841_1239 | ABC-2 type transport system ATP-binding protein. | F-type H+-transporting ATPase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.798 |
SEW32524.1 | atpG | SAMN05421841_2305 | SAMN05421841_1166 | ABC-2 type transport system ATP-binding protein. | F-type H+-transporting ATPase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.718 |
SEW32531.1 | SEW32524.1 | SAMN05421841_2306 | SAMN05421841_2305 | ABC-type transport system involved in multi-copper enzyme maturation, permease component. | ABC-2 type transport system ATP-binding protein. | 0.993 |
SEW32531.1 | SEW32540.1 | SAMN05421841_2306 | SAMN05421841_2307 | ABC-type transport system involved in multi-copper enzyme maturation, permease component. | Hypothetical protein. | 0.675 |
SEW32531.1 | SEW32548.1 | SAMN05421841_2306 | SAMN05421841_2308 | ABC-type transport system involved in multi-copper enzyme maturation, permease component. | Hypothetical protein. | 0.675 |
SEW32540.1 | SEW32524.1 | SAMN05421841_2307 | SAMN05421841_2305 | Hypothetical protein. | ABC-2 type transport system ATP-binding protein. | 0.675 |
page 1 of 2