STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW48855.1Chemotaxis protein MotB. (277 aa)    
Predicted Functional Partners:
SEW45099.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 
   0.838
SEW15357.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
   
   0.815
SEW48944.1
Preprotein translocase subunit YajC.
    
 
 0.754
SEW02311.1
Signal transduction histidine kinase.
  
  
 0.739
SEW28924.1
GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
    
   0.733
SEW39044.1
Hypothetical protein.
    
   0.733
SEW25974.1
Signal transduction histidine kinase.
  
  
 0.729
SEW47566.1
Outer membrane protein OmpA.
  
 
 0.726
SEW23793.1
Glucuronoarabinoxylan endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 30 family.
 
  
 0.702
SEW48848.1
Biopolymer transport protein ExbD.
 
 
 
 0.679
Your Current Organism:
Chryseobacterium wanjuense
NCBI taxonomy Id: 356305
Other names: C. wanjuense, Chryseobacterium wanjuense Weon et al. 2006 emend. Montero-Calasanz et al. 2013, DSM 17724, KACC 11468, strain R2A10-2
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