STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW48948.1Short-chain dehydrogenase. (243 aa)    
Predicted Functional Partners:
SEW47555.1
FAD/FMN-containing dehydrogenase.
 
   
 0.776
SEW47560.1
4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family.
  
     0.769
SEW26638.1
Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein.
 
 
 0.696
SEW09977.1
Polyketide-type polyunsaturated fatty acid synthase PfaA.
   
 0.627
SEW47548.1
HAD-superfamily subfamily IB hydrolase, TIGR01490.
 
     0.624
SEW26674.1
Cytochrome P450.
  
 0.533
SEW02719.1
Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.509
SEW42357.1
Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.508
SEW48938.1
Protein of unknown function.
       0.487
SEW48944.1
Preprotein translocase subunit YajC.
       0.487
Your Current Organism:
Chryseobacterium wanjuense
NCBI taxonomy Id: 356305
Other names: C. wanjuense, Chryseobacterium wanjuense Weon et al. 2006 emend. Montero-Calasanz et al. 2013, DSM 17724, KACC 11468, strain R2A10-2
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