STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW25529.1Nicotinamidase-related amidase. (221 aa)    
Predicted Functional Partners:
SDW25600.1
Allophanate hydrolase.
  
  0.986
SDW44704.1
Amidase; Belongs to the amidase family.
 
   
  0.914
amiF
Formamidase; Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide; Belongs to the carbon-nitrogen hydrolase superfamily. Aliphatic amidase family.
 
 
   0.896
SDW25564.1
anti-ECFsigma factor, ChrR.
 
     0.868
SDW25492.1
Nucleoside ABC transporter ATP-binding protein.
 
     0.864
SDW25375.1
Nicotinamidase-related amidase.
 
    
0.789
SDX33987.1
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family.
 
   
  0.753
SDX34720.1
Dibenzothiophene-5,5-dioxide monooxygenase.
 
 
  0.681
SDX69869.1
Biotin-requiring enzyme.
  
 
  0.671
SDW87862.1
Maleamate amidohydrolase.
  
     0.645
Your Current Organism:
Albimonas donghaensis
NCBI taxonomy Id: 356660
Other names: A. donghaensis, Albimonas donghaensis Lim et al. 2008, DSM 17890, KCTC 12586, Paracoccus sp. DS2, strain DS2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.