SDW04703.1 protein (Albimonas donghaensis) - STRING interaction network

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Score

SDW04703.1

YHYH protein. (390 aa)

Predicted Functional Partners:

rplB

0.931

rpsB

0.931

rpsP

0.931

rpsJ

0.927

rplS

0.927

rpmJ

0.926

rplM

0.925

rpsO

0.925

rpmF

0.925

rpsE

0.925

Your Current Organism:

Albimonas donghaensis

NCBI taxonomy Id: 356660
Other names: A. donghaensis, Albimonas donghaensis Lim et al. 2008, DSM 17890, KCTC 12586, Paracoccus sp. DS2, strain DS2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SDW04703.1	rplB	SAMN05444336_1019	SAMN05444336_107150	YHYH protein.	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.931
SDW04703.1	rplM	SAMN05444336_1019	SAMN05444336_101408	YHYH protein.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.925
SDW04703.1	rplS	SAMN05444336_1019	SAMN05444336_11512	YHYH protein.	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.927
SDW04703.1	rpmF	SAMN05444336_1019	SAMN05444336_10465	YHYH protein.	LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family.	0.925
SDW04703.1	rpmJ	SAMN05444336_1019	SAMN05444336_10791	YHYH protein.	LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family.	0.926
SDW04703.1	rpsB	SAMN05444336_1019	SAMN05444336_10781	YHYH protein.	SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family.	0.931
SDW04703.1	rpsE	SAMN05444336_1019	SAMN05444336_107136	YHYH protein.	SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.925
SDW04703.1	rpsJ	SAMN05444336_1019	SAMN05444336_107154	YHYH protein.	SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.927
SDW04703.1	rpsO	SAMN05444336_1019	SAMN05444336_103202	YHYH protein.	SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.925
SDW04703.1	rpsP	SAMN05444336_1019	SAMN05444336_1159	YHYH protein.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.931
rplB	SDW04703.1	SAMN05444336_107150	SAMN05444336_1019	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	YHYH protein.	0.931
rplB	rplM	SAMN05444336_107150	SAMN05444336_101408	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
rplB	rplS	SAMN05444336_107150	SAMN05444336_11512	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.995
rplB	rpmF	SAMN05444336_107150	SAMN05444336_10465	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family.	0.989
rplB	rpmJ	SAMN05444336_107150	SAMN05444336_10791	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family.	0.995
rplB	rpsB	SAMN05444336_107150	SAMN05444336_10781	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family.	0.997
rplB	rpsE	SAMN05444336_107150	SAMN05444336_107136	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.999
rplB	rpsJ	SAMN05444336_107150	SAMN05444336_107154	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.999
rplB	rpsO	SAMN05444336_107150	SAMN05444336_103202	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.995
rplB	rpsP	SAMN05444336_107150	SAMN05444336_1159	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.995