STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW74208.1Transcriptional regulator, MarR family with acetyltransferase activity. (339 aa)    
Predicted Functional Partners:
SDX73270.1
Glutamate synthase (NADPH) large subunit.
     
 0.662
SDW44477.1
Transcriptional regulator, XRE family with cupin sensor.
  
 0.610
SDW22597.1
Glyoxalase-like domain-containing protein.
 
  
  0.536
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 
 0.535
SDX88479.1
N-Dimethylarginine dimethylaminohydrolase.
  
  
  0.518
SDX15525.1
Acyl transferase domain-containing protein.
  
 
 0.508
tsaD
O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
     
 0.504
SDX53353.1
Transcriptional regulator, contains XRE-family HTH domain.
  
 
  0.495
SDW27510.1
Hypothetical protein.
    
  0.482
SDW42585.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
    
  0.482
Your Current Organism:
Albimonas donghaensis
NCBI taxonomy Id: 356660
Other names: A. donghaensis, Albimonas donghaensis Lim et al. 2008, DSM 17890, KCTC 12586, Paracoccus sp. DS2, strain DS2
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