STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW79676.1Na+/melibiose symporter. (457 aa)    
Predicted Functional Partners:
SDW79566.1
Hypothetical protein.
 
  
 0.952
SDW79529.1
Predicted NAD/FAD-binding protein.
 
   
 0.864
SDW79609.1
Cyclopropane-fatty-acyl-phospholipid synthase.
 
  
 0.740
SDW78281.1
anti-ECFsigma factor, ChrR.
 
   
 0.736
SDW78355.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.570
SDX66109.1
Isoquinoline 1-oxidoreductase, beta subunit.
   
    0.550
SDW79495.1
Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family.
 
    0.500
SDW78324.1
Hypothetical protein.
  
     0.452
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
  0.446
SDX96117.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
   
 0.446
Your Current Organism:
Albimonas donghaensis
NCBI taxonomy Id: 356660
Other names: A. donghaensis, Albimonas donghaensis Lim et al. 2008, DSM 17890, KCTC 12586, Paracoccus sp. DS2, strain DS2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.