STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX29106.1Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. (314 aa)    
Predicted Functional Partners:
SDW18850.1
OHCU decarboxylase.
 
  0.966
SDX29073.1
Asp/Glu/hydantoin racemase.
 
  
  0.930
SDW87609.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
  
  
 
0.738
SDW33305.1
5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
 
  0.730
SDW50295.1
Asp/Glu/hydantoin racemase.
 
  
  0.713
SDX53427.1
Allantoin racemase.
 
  
  0.698
SDW18882.1
Uncharacterized membrane protein.
 
    0.590
SDX29033.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
       0.570
SDW46657.1
Protein of unknown function.
  
 
 0.534
SDX14038.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
  
 
 0.534
Your Current Organism:
Albimonas donghaensis
NCBI taxonomy Id: 356660
Other names: A. donghaensis, Albimonas donghaensis Lim et al. 2008, DSM 17890, KCTC 12586, Paracoccus sp. DS2, strain DS2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.