STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX31598.1PAS domain-containing protein. (253 aa)    
Predicted Functional Partners:
SDX30942.1
Protein of unknown function.
  
    0.678
SDX59603.1
Protein of unknown function.
  
     0.674
SDX14038.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
  
    0.624
SDX25013.1
dCTP deaminase.
  
     0.620
SDW18746.1
Cell division protein ZapA.
  
     0.569
SDW73991.1
HemY protein.
  
     0.553
SDX09473.1
DNA-binding transcriptional regulator, CsgD family.
  
    0.547
SDX82904.1
Invasion protein IalB, involved in pathogenesis.
  
     0.540
SDX09607.1
Acyl homoserine lactone synthase.
  
    0.514
SDX09511.1
Acyl homoserine lactone synthase.
  
    0.513
Your Current Organism:
Albimonas donghaensis
NCBI taxonomy Id: 356660
Other names: A. donghaensis, Albimonas donghaensis Lim et al. 2008, DSM 17890, KCTC 12586, Paracoccus sp. DS2, strain DS2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.