STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX65708.12-hydroxychromene-2-carboxylate isomerase. (203 aa)    
Predicted Functional Partners:
SDX65676.1
Hypothetical protein.
 
     0.921
SDW88808.1
2-hydroxychromene-2-carboxylate isomerase.
  
     0.693
SDX80659.1
Quinol monooxygenase YgiN.
  
    0.596
SDX67997.1
Glutathione S-transferase.
  
     0.497
SDX47662.1
acetyl-CoA C-acetyltransferase.
  
     0.484
SDW44667.1
acetyl-CoA C-acetyltransferase.
  
     0.470
SDX29744.1
Acyl-coenzyme A thioesterase PaaI, contains HGG motif.
 
     0.467
SDX65651.1
Enoyl-CoA hydratase/carnithine racemase.
       0.445
SDX16299.1
Uncharacterized domain 1-containing protein.
 
     0.435
SDX33413.1
acyl-CoA dehydrogenase.
  
     0.410
Your Current Organism:
Albimonas donghaensis
NCBI taxonomy Id: 356660
Other names: A. donghaensis, Albimonas donghaensis Lim et al. 2008, DSM 17890, KCTC 12586, Paracoccus sp. DS2, strain DS2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.