STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX67248.1Transcriptional regulator, IclR family. (284 aa)    
Predicted Functional Partners:
SDX80250.1
Transcriptional regulator, IclR family.
  
     0.774
SDX67158.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
       0.773
SDX67185.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
       0.773
SDX67216.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
       0.773
SDW11590.1
Transcriptional regulator, IclR family.
  
     0.771
SDX27614.1
Transcriptional regulator, IclR family.
  
     0.770
SDX23233.1
Transcriptional regulator, IclR family.
  
     0.769
SDW67073.1
Transcriptional regulator, IclR family.
  
     0.765
SDX40948.1
Transcriptional regulator, IclR family.
  
     0.763
SDX69869.1
Biotin-requiring enzyme.
  
 
  0.762
Your Current Organism:
Albimonas donghaensis
NCBI taxonomy Id: 356660
Other names: A. donghaensis, Albimonas donghaensis Lim et al. 2008, DSM 17890, KCTC 12586, Paracoccus sp. DS2, strain DS2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.