STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX73700.1Tight adherence protein C. (329 aa)    
Predicted Functional Partners:
SDX73734.1
Tight adherence protein B.
 
  
 0.998
SDX73792.1
Pilus assembly protein CpaE.
 
  
 0.984
SDX73886.1
Pilus assembly protein CpaB.
 
  
 0.979
SDX73761.1
Pilus assembly protein CpaF.
 
  
 0.960
SDX73854.1
Pilus assembly protein CpaC; Belongs to the bacterial secretin family.
 
  
 0.958
SDW80605.1
ATPase family associated with various cellular activities (AAA).
 
    0.932
SDW86272.1
Flagellar protein FlbT.
   
    0.925
SDX93830.1
Type IV secretion system protein VirB11.
 
  
 0.924
SDX73641.1
Tetratricopeptide repeat-containing protein.
 
  
 0.921
SDX73609.1
Prepilin peptidase CpaA.
 
   
 0.854
Your Current Organism:
Albimonas donghaensis
NCBI taxonomy Id: 356660
Other names: A. donghaensis, Albimonas donghaensis Lim et al. 2008, DSM 17890, KCTC 12586, Paracoccus sp. DS2, strain DS2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.