Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDW44584.1 | SDX15525.1 | SAMN05444336_1011032 | SAMN05444336_103465 | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | Acyl transferase domain-containing protein. | 0.639 |
| SDW44584.1 | SDX77398.1 | SAMN05444336_1011032 | SAMN05444336_1103 | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | Methyltransferase, FkbM family. | 0.497 |
| SDW44584.1 | SDX95914.1 | SAMN05444336_1011032 | SAMN05444336_11516 | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 0.964 |
| SDW44584.1 | gcvP | SAMN05444336_1011032 | SAMN05444336_111101 | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.997 |
| SDX15525.1 | SDW44584.1 | SAMN05444336_103465 | SAMN05444336_1011032 | Acyl transferase domain-containing protein. | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | 0.639 |
| SDX15525.1 | SDX77398.1 | SAMN05444336_103465 | SAMN05444336_1103 | Acyl transferase domain-containing protein. | Methyltransferase, FkbM family. | 0.556 |
| SDX15525.1 | SDX95914.1 | SAMN05444336_103465 | SAMN05444336_11516 | Acyl transferase domain-containing protein. | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 0.639 |
| SDX15525.1 | gcvP | SAMN05444336_103465 | SAMN05444336_111101 | Acyl transferase domain-containing protein. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.706 |
| SDX77372.1 | SDX77398.1 | SAMN05444336_1102 | SAMN05444336_1103 | Hypothetical protein. | Methyltransferase, FkbM family. | 0.561 |
| SDX77398.1 | SDW44584.1 | SAMN05444336_1103 | SAMN05444336_1011032 | Methyltransferase, FkbM family. | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | 0.497 |
| SDX77398.1 | SDX15525.1 | SAMN05444336_1103 | SAMN05444336_103465 | Methyltransferase, FkbM family. | Acyl transferase domain-containing protein. | 0.556 |
| SDX77398.1 | SDX77372.1 | SAMN05444336_1103 | SAMN05444336_1102 | Methyltransferase, FkbM family. | Hypothetical protein. | 0.561 |
| SDX77398.1 | SDX95914.1 | SAMN05444336_1103 | SAMN05444336_11516 | Methyltransferase, FkbM family. | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 0.497 |
| SDX77398.1 | gcvP | SAMN05444336_1103 | SAMN05444336_111101 | Methyltransferase, FkbM family. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.705 |
| SDX95914.1 | SDW44584.1 | SAMN05444336_11516 | SAMN05444336_1011032 | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | 0.964 |
| SDX95914.1 | SDX15525.1 | SAMN05444336_11516 | SAMN05444336_103465 | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | Acyl transferase domain-containing protein. | 0.639 |
| SDX95914.1 | SDX77398.1 | SAMN05444336_11516 | SAMN05444336_1103 | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | Methyltransferase, FkbM family. | 0.497 |
| SDX95914.1 | gcvP | SAMN05444336_11516 | SAMN05444336_111101 | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.997 |
| gcvP | SDW44584.1 | SAMN05444336_111101 | SAMN05444336_1011032 | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | 0.997 |
| gcvP | SDX15525.1 | SAMN05444336_111101 | SAMN05444336_103465 | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Acyl transferase domain-containing protein. | 0.706 |
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