STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX94399.1Copper resistance protein B. (231 aa)    
Predicted Functional Partners:
SDX94440.1
Copper-resistance protein, CopA family.
 
  
 0.995
SDX94473.1
Uncharacterized copper-binding protein, cupredoxin-like subfamily.
 
  
 0.964
SDW48390.1
Hypothetical protein.
  
  
 0.679
SDX94374.1
Hypothetical protein.
 
    0.643
SDX94341.1
Amino acid/polyamine/organocation transporter, APC superfamily.
 
     0.642
SDX32988.1
Cholesterol transport system auxiliary component.
  
     0.576
SDW31539.1
Cu+-exporting ATPase.
     
 0.542
SDX94302.1
Cu+-exporting ATPase.
 
   
 0.538
SDW31575.1
Transcriptional regulator.
 
  
 0.455
SDX11826.1
Porin.
  
     0.447
Your Current Organism:
Albimonas donghaensis
NCBI taxonomy Id: 356660
Other names: A. donghaensis, Albimonas donghaensis Lim et al. 2008, DSM 17890, KCTC 12586, Paracoccus sp. DS2, strain DS2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.