STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX96314.1Hypothetical protein. (257 aa)    
Predicted Functional Partners:
lysS
lysyl-tRNA synthetase, class I; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.786
SDW43011.1
Hypothetical protein.
  
   
 0.781
SDX11096.1
Predicted lipid-binding transport protein, Tim44 family.
  
     0.772
SDW85814.1
Uncharacterized conserved protein, UPF0335 family; Belongs to the UPF0335 family.
  
   
 0.759
recO
DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.750
SDX58825.1
Disulfide bond formation protein DsbB.
  
     0.719
SDX60304.1
Transcriptional regulator, contains XRE-family HTH domain.
  
     0.718
yidC
Protein translocase subunit yidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
  
     0.696
SDX75633.1
DNA helicase/exodeoxyribonuclease V, subunit A; Belongs to the helicase family. UvrD subfamily.
  
     0.685
SDW12103.1
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
   
    0.684
Your Current Organism:
Albimonas donghaensis
NCBI taxonomy Id: 356660
Other names: A. donghaensis, Albimonas donghaensis Lim et al. 2008, DSM 17890, KCTC 12586, Paracoccus sp. DS2, strain DS2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.