STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX97809.1Thiaminase (transcriptional activator TenA). (227 aa)    
Predicted Functional Partners:
SDW12519.1
Hydroxymethylpyrimidine kinase.
 
 0.999
thiM
Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.
 
 
 0.974
thiE
Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
 
 
 0.889
SDW29282.1
Thiamine diphosphokinase.
    
 0.881
SDW16912.1
Putative hydroxymethylpyrimidine transport system substrate-binding protein.
 
    0.809
SDW16949.1
Putative hydroxymethylpyrimidine transport system ATP-binding protein.
 
    0.721
SDX31335.1
Thiamine-phosphate pyrophosphorylase.
  
 
 0.665
SDW16987.1
Putative hydroxymethylpyrimidine transport system permease protein.
 
    0.616
SDW38298.1
Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family.
 
      0.614
SDX05996.1
Molybdopterin or thiamine biosynthesis adenylyltransferase.
  
  
 0.614
Your Current Organism:
Albimonas donghaensis
NCBI taxonomy Id: 356660
Other names: A. donghaensis, Albimonas donghaensis Lim et al. 2008, DSM 17890, KCTC 12586, Paracoccus sp. DS2, strain DS2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.