BITS_1237 protein (Bifidobacterium tsurumiense)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

BITS_1237

ABC transporter, permease protein. (226 aa)

Predicted Functional Partners:

metN-2

0.997

BITS_1236

0.994

BITS_0768

0.989

metN

0.987

metAA

0.501

BITS_1239

0.480

Your Current Organism:

Bifidobacterium tsurumiense

NCBI taxonomy Id: 356829
Other names: B. tsurumiense, Bifidobacterium tsurumiense Okamoto et al. 2008, DSM 17777, JCM 13495, strain OMB115

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BITS_0768	BITS_1237	BITS_0768	BITS_1237	ABC-type metal ion transport system, periplasmic component/surface antigen.	ABC transporter, permease protein.	0.989
BITS_0768	metN	BITS_0768	BITS_0769	ABC-type metal ion transport system, periplasmic component/surface antigen.	ABC transporter; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.	0.992
BITS_0768	metN-2	BITS_0768	BITS_1238	ABC-type metal ion transport system, periplasmic component/surface antigen.	ABC transporter, ATP binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.	0.987
BITS_1236	BITS_1237	BITS_1236	BITS_1237	ABC transporter, extracellular substrate binding protein.	ABC transporter, permease protein.	0.994
BITS_1236	metN	BITS_1236	BITS_0769	ABC transporter, extracellular substrate binding protein.	ABC transporter; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.	0.987
BITS_1236	metN-2	BITS_1236	BITS_1238	ABC transporter, extracellular substrate binding protein.	ABC transporter, ATP binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.	0.992
BITS_1237	BITS_0768	BITS_1237	BITS_0768	ABC transporter, permease protein.	ABC-type metal ion transport system, periplasmic component/surface antigen.	0.989
BITS_1237	BITS_1236	BITS_1237	BITS_1236	ABC transporter, permease protein.	ABC transporter, extracellular substrate binding protein.	0.994
BITS_1237	BITS_1239	BITS_1237	BITS_1239	ABC transporter, permease protein.	bdhA NADH-dependent butanol dehydrogenase.	0.480
BITS_1237	metAA	BITS_1237	BITS_0608	ABC transporter, permease protein.	Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.	0.501
BITS_1237	metN	BITS_1237	BITS_0769	ABC transporter, permease protein.	ABC transporter; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.	0.987
BITS_1237	metN-2	BITS_1237	BITS_1238	ABC transporter, permease protein.	ABC transporter, ATP binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.	0.997
BITS_1239	BITS_1237	BITS_1239	BITS_1237	bdhA NADH-dependent butanol dehydrogenase.	ABC transporter, permease protein.	0.480
BITS_1239	metN-2	BITS_1239	BITS_1238	bdhA NADH-dependent butanol dehydrogenase.	ABC transporter, ATP binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.	0.480
metAA	BITS_1237	BITS_0608	BITS_1237	Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.	ABC transporter, permease protein.	0.501
metAA	metN	BITS_0608	BITS_0769	Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.	ABC transporter; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.	0.511
metAA	metN-2	BITS_0608	BITS_1238	Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.	ABC transporter, ATP binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.	0.511
metN	BITS_0768	BITS_0769	BITS_0768	ABC transporter; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.	ABC-type metal ion transport system, periplasmic component/surface antigen.	0.992
metN	BITS_1236	BITS_0769	BITS_1236	ABC transporter; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.	ABC transporter, extracellular substrate binding protein.	0.987
metN	BITS_1237	BITS_0769	BITS_1237	ABC transporter; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.	ABC transporter, permease protein.	0.987