STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMCG_10550Carrier domain-containing protein. (2524 aa)    
Predicted Functional Partners:
VMCG_02060
ACPS domain-containing protein.
   
 0.682
VMCG_09121
Uncharacterized protein.
   
 0.633
VMCG_09872
Carrier domain-containing protein.
 
 0.603
VMCG_05176
Ketoacyl_synth_N domain-containing protein.
  
 
0.580
VMCG_07597
PKS_AT domain-containing protein.
  
 0.551
VMCG_10891
Uncharacterized protein.
   
 0.524
VMCG_02784
NAD_binding_4 domain-containing protein.
   
 0.515
VMCG_01199
Carrier domain-containing protein.
 
 
 0.515
VMCG_00309
Carrier domain-containing protein.
 
 
 0.515
VMCG_10605
Uncharacterized protein.
   
  0.505
Your Current Organism:
Valsa malicola
NCBI taxonomy Id: 356882
Other names: V. malicola
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.