STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMCG_09808Uncharacterized protein. (255 aa)    
Predicted Functional Partners:
VMCG_02433
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.923
VMCG_05288
CDC73_C domain-containing protein.
    
 0.780
VMCG_02884
Uncharacterized protein.
    
 0.778
VMCG_06883
DOC domain-containing protein.
    
 0.775
VMCG_00246
Uncharacterized protein.
    
 0.775
VMCG_09201
Uncharacterized protein.
    
 0.774
VMCG_01695
HMG box domain-containing protein.
    
 0.771
VMCG_09437
Uncharacterized protein.
    
 0.768
VMCG_07224
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.762
VMCG_07648
Uncharacterized protein.
    
 0.718
Your Current Organism:
Valsa malicola
NCBI taxonomy Id: 356882
Other names: V. malicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.