STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMCG_09584Na_H_Exchanger domain-containing protein. (931 aa)    
Predicted Functional Partners:
VMCG_00467
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
   
 
 0.667
VMCG_04703
JmjC domain-containing protein.
  
  
 0.617
VMCG_05453
Na_H_Exchanger domain-containing protein.
   
 
 0.523
VMCG_00525
Uncharacterized protein.
   
 
 0.523
VMCG_07590
Peptidase_M48 domain-containing protein.
  
  
 0.488
VMCG_03833
Na_H_Exchanger domain-containing protein.
   
 
 0.473
VMCG_03539
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.
     
 0.462
VMCG_05891
Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
      
 0.433
VMCG_04531
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
      
 0.428
VMCG_00024
HMA domain-containing protein.
  
  
 0.415
Your Current Organism:
Valsa malicola
NCBI taxonomy Id: 356882
Other names: V. malicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.