STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMCG_09698Uncharacterized protein. (268 aa)    
Predicted Functional Partners:
VMCG_08114
AB hydrolase-1 domain-containing protein.
    
 0.882
VMCG_07943
AB hydrolase-1 domain-containing protein.
    
 0.882
VMCG_06429
AB hydrolase-1 domain-containing protein.
    
 0.882
VMCG_05803
AB hydrolase-1 domain-containing protein.
    
 0.882
VMCG_05001
Aminotran_1_2 domain-containing protein.
  
 
 0.882
VMCG_01469
AB hydrolase-1 domain-containing protein.
    
 0.882
VMCG_00756
AB hydrolase-1 domain-containing protein.
    
 0.882
VMCG_08167
Imidazole glycerol phosphate synthase hisHF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The glutaminase domain produces the ammonia necessary for the cyclase domain to produce IGP and AICAR from PRFAR. The ammonia is channeled to the active site of the cyclase domain. Belongs to the HisA/HisF family.
  
 
 0.877
VMCG_04650
Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family.
    
 0.877
VMCG_09550
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.870
Your Current Organism:
Valsa malicola
NCBI taxonomy Id: 356882
Other names: V. malicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.