STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMCG_09670WD_REPEATS_REGION domain-containing protein. (318 aa)    
Predicted Functional Partners:
VMCG_09190
Ribosomal_S10 domain-containing protein.
   
 
 0.999
VMCG_09158
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 
 0.999
VMCG_08608
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.999
VMCG_06926
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 
 0.999
VMCG_07437
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.999
VMCG_06584
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 
 0.999
VMCG_04600
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 
 0.999
VMCG_00249
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.999
VMCG_10618
Uncharacterized protein.
   
 
 0.998
VMCG_09910
KOW domain-containing protein.
   
 
 0.998
Your Current Organism:
Valsa malicola
NCBI taxonomy Id: 356882
Other names: V. malicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.