STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMCG_09460Uncharacterized protein. (489 aa)    
Predicted Functional Partners:
VMCG_03136
Uncharacterized protein.
     
 0.864
VMCG_09408
Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate.
     
 0.856
VMCG_07513
Pyruvate carboxyltransferase domain-containing protein.
     
 0.841
VMCG_07431
S5A_REDUCTASE domain-containing protein.
   
 
 0.825
VMCG_01275
Uncharacterized protein.
   
 
  0.822
VMCG_02886
Uncharacterized protein.
     
 0.813
VMCG_00768
S5A_REDUCTASE domain-containing protein.
     
 0.812
VMCG_10436
CRAL-TRIO domain-containing protein.
    
 0.709
VMCG_04737
CRAL-TRIO domain-containing protein.
    
 0.709
VMCG_03872
CRAL-TRIO domain-containing protein.
    
 0.709
Your Current Organism:
Valsa malicola
NCBI taxonomy Id: 356882
Other names: V. malicola
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