Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VMCG_01972 | VMCG_03914 | A0A423X404 | A0A423WVJ2 | N-acetyltransferase domain-containing protein; In the N-terminal section; belongs to the acetylglutamate kinase family. | Uncharacterized protein. | 0.724 |
VMCG_01972 | VMCG_09286 | A0A423X404 | A0A423VMD8 | N-acetyltransferase domain-containing protein; In the N-terminal section; belongs to the acetylglutamate kinase family. | AlcB domain-containing protein. | 0.817 |
VMCG_03539 | VMCG_07876 | A0A423WWV2 | A0A423W0J2 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.435 |
VMCG_03539 | VMCG_09286 | A0A423WWV2 | A0A423VMD8 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. | AlcB domain-containing protein. | 0.652 |
VMCG_03914 | VMCG_01972 | A0A423WVJ2 | A0A423X404 | Uncharacterized protein. | N-acetyltransferase domain-containing protein; In the N-terminal section; belongs to the acetylglutamate kinase family. | 0.724 |
VMCG_03914 | VMCG_07015 | A0A423WVJ2 | A0A423W417 | Uncharacterized protein. | Uncharacterized protein. | 0.401 |
VMCG_03914 | VMCG_07681 | A0A423WVJ2 | A0A423VZ17 | Uncharacterized protein. | Uncharacterized protein. | 0.401 |
VMCG_03914 | VMCG_09244 | A0A423WVJ2 | A0A423VKX2 | Uncharacterized protein. | Ion_trans domain-containing protein. | 0.401 |
VMCG_03914 | VMCG_09286 | A0A423WVJ2 | A0A423VMD8 | Uncharacterized protein. | AlcB domain-containing protein. | 0.835 |
VMCG_03914 | VMCG_10048 | A0A423WVJ2 | A0A423VD97 | Uncharacterized protein. | Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily. | 0.972 |
VMCG_03914 | VMCG_10524 | A0A423WVJ2 | A0A423VBS2 | Uncharacterized protein. | APH domain-containing protein. | 0.401 |
VMCG_03914 | VMCG_10533 | A0A423WVJ2 | A0A423VBR8 | Uncharacterized protein. | Uncharacterized protein. | 0.401 |
VMCG_07015 | VMCG_03914 | A0A423W417 | A0A423WVJ2 | Uncharacterized protein. | Uncharacterized protein. | 0.401 |
VMCG_07015 | VMCG_09286 | A0A423W417 | A0A423VMD8 | Uncharacterized protein. | AlcB domain-containing protein. | 0.646 |
VMCG_07681 | VMCG_03914 | A0A423VZ17 | A0A423WVJ2 | Uncharacterized protein. | Uncharacterized protein. | 0.401 |
VMCG_07681 | VMCG_09286 | A0A423VZ17 | A0A423VMD8 | Uncharacterized protein. | AlcB domain-containing protein. | 0.646 |
VMCG_07876 | VMCG_03539 | A0A423W0J2 | A0A423WWV2 | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. | 0.435 |
VMCG_07876 | VMCG_09286 | A0A423W0J2 | A0A423VMD8 | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | AlcB domain-containing protein. | 0.722 |
VMCG_09244 | VMCG_03914 | A0A423VKX2 | A0A423WVJ2 | Ion_trans domain-containing protein. | Uncharacterized protein. | 0.401 |
VMCG_09244 | VMCG_09286 | A0A423VKX2 | A0A423VMD8 | Ion_trans domain-containing protein. | AlcB domain-containing protein. | 0.646 |
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