STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMCG_07776Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family. (397 aa)    
Predicted Functional Partners:
VMCG_04140
Uncharacterized protein.
     
 0.861
VMCG_04378
Alpha-L-AF_C domain-containing protein.
     
 0.826
VMCG_01633
Alpha-L-AF_C domain-containing protein.
     
 0.826
VMCG_03282
GH43_C2 domain-containing protein; Belongs to the glycosyl hydrolase 43 family.
     
 0.810
VMCG_10830
Uncharacterized protein.
  
  
0.754
VMCG_06608
Uncharacterized protein.
  
  
0.751
VMCG_05487
Uncharacterized protein.
    
 0.723
VMCG_01708
Uncharacterized protein.
   
   0.691
VMCG_09259
Uncharacterized protein.
    
 0.686
VMCG_05329
Uncharacterized protein.
    
 0.686
Your Current Organism:
Valsa malicola
NCBI taxonomy Id: 356882
Other names: V. malicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.