STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMCG_07496ABC transporter domain-containing protein. (719 aa)    
Predicted Functional Partners:
VMCG_03369
Uncharacterized protein.
  
 
0.921
VMCG_06538
Uncharacterized protein.
    
 0.871
VMCG_00782
Uncharacterized protein.
   
 0.816
VMCG_03019
Pex14_N domain-containing protein.
    
 0.784
VMCG_03626
Uncharacterized protein.
    
 0.769
VMCG_02232
MaoC-like domain-containing protein.
   
 
 0.757
VMCG_08373
SH3 domain-containing protein.
   
 
 0.748
VMCG_03047
Uncharacterized protein.
   
 
 0.748
VMCG_08929
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.746
VMCG_08481
Peroxisomal membrane protein PEX16.
     
 0.735
Your Current Organism:
Valsa malicola
NCBI taxonomy Id: 356882
Other names: V. malicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.