STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMCG_06015Aldo_ket_red domain-containing protein. (306 aa)    
Predicted Functional Partners:
VMCG_04222
Tryptophan synthase.
    
  0.812
VMCG_02957
FAD-binding FR-type domain-containing protein.
     
 0.706
VMCG_07647
Uncharacterized protein.
    
 0.696
VMCG_10574
Aldedh domain-containing protein.
   
 0.576
VMCG_08593
Uncharacterized protein.
   
 
 0.539
VMCG_02951
Uncharacterized protein.
   
 
 0.539
VMCG_07528
Uncharacterized protein.
   
 0.533
VMCG_07431
S5A_REDUCTASE domain-containing protein.
   
 
 0.528
VMCG_03013
Uncharacterized protein; Belongs to the FGGY kinase family.
     
 0.520
VMCG_00558
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
   
 
  0.499
Your Current Organism:
Valsa malicola
NCBI taxonomy Id: 356882
Other names: V. malicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.