Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VMCG_00188 | VMCG_03475 | A0A423X858 | A0A423WW90 | Nuclear cap-binding protein subunit 2. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.773 |
VMCG_00188 | VMCG_03755 | A0A423X858 | A0A423WUI7 | Nuclear cap-binding protein subunit 2. | Uncharacterized protein. | 0.495 |
VMCG_00188 | VMCG_03891 | A0A423X858 | A0A423WV42 | Nuclear cap-binding protein subunit 2. | RRM domain-containing protein. | 0.925 |
VMCG_00188 | VMCG_04306 | A0A423X858 | A0A423WSF2 | Nuclear cap-binding protein subunit 2. | CID domain-containing protein. | 0.770 |
VMCG_00188 | VMCG_04319 | A0A423X858 | A0A423WTM4 | Nuclear cap-binding protein subunit 2. | Uncharacterized protein. | 0.870 |
VMCG_00188 | VMCG_07570 | A0A423X858 | A0A423VXD2 | Nuclear cap-binding protein subunit 2. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.798 |
VMCG_00188 | VMCG_07630 | A0A423X858 | A0A423VXC5 | Nuclear cap-binding protein subunit 2. | Uncharacterized protein. | 0.495 |
VMCG_00188 | VMCG_08452 | A0A423X858 | A0A423VWM0 | Nuclear cap-binding protein subunit 2. | Uncharacterized protein. | 0.646 |
VMCG_00188 | VMCG_10837 | A0A423X858 | A0A423V8G4 | Nuclear cap-binding protein subunit 2. | Uncharacterized protein. | 0.999 |
VMCG_03093 | VMCG_03891 | A0A423WY32 | A0A423WV42 | Uncharacterized protein. | RRM domain-containing protein. | 0.576 |
VMCG_03093 | VMCG_04319 | A0A423WY32 | A0A423WTM4 | Uncharacterized protein. | Uncharacterized protein. | 0.883 |
VMCG_03475 | VMCG_00188 | A0A423WW90 | A0A423X858 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Nuclear cap-binding protein subunit 2. | 0.773 |
VMCG_03475 | VMCG_03891 | A0A423WW90 | A0A423WV42 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RRM domain-containing protein. | 0.770 |
VMCG_03475 | VMCG_04306 | A0A423WW90 | A0A423WSF2 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | CID domain-containing protein. | 0.943 |
VMCG_03475 | VMCG_04319 | A0A423WW90 | A0A423WTM4 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.951 |
VMCG_03475 | VMCG_07570 | A0A423WW90 | A0A423VXD2 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
VMCG_03475 | VMCG_08452 | A0A423WW90 | A0A423VWM0 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.917 |
VMCG_03475 | VMCG_10837 | A0A423WW90 | A0A423V8G4 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.773 |
VMCG_03755 | VMCG_00188 | A0A423WUI7 | A0A423X858 | Uncharacterized protein. | Nuclear cap-binding protein subunit 2. | 0.495 |
VMCG_03755 | VMCG_04319 | A0A423WUI7 | A0A423WTM4 | Uncharacterized protein. | Uncharacterized protein. | 0.722 |
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