STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMCG_03644FAD-binding FR-type domain-containing protein. (553 aa)    
Predicted Functional Partners:
VMCG_00025
Uncharacterized protein.
  
 0.767
VMCG_05303
Uncharacterized protein.
    
 0.542
VMCG_02120
Uncharacterized protein.
    
 0.512
VMCG_09822
HORMA domain-containing protein.
 
  
   0.506
VMCG_04450
MHYT domain-containing protein.
    
  0.505
VMCG_08647
Uncharacterized protein.
    
 0.496
VMCG_02585
Uncharacterized protein.
    
 0.496
VMCG_08992
Apple domain-containing protein.
    
  0.484
VMCG_02913
Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.
    
  0.484
VMCG_05027
Uncharacterized protein.
    
 
 0.457
Your Current Organism:
Valsa malicola
NCBI taxonomy Id: 356882
Other names: V. malicola
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