STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMCG_02691t-SNARE coiled-coil homology domain-containing protein. (256 aa)    
Predicted Functional Partners:
VMCG_09524
t-SNARE coiled-coil homology domain-containing protein.
    
 0.999
VMCG_02754
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.998
VMCG_01973
V-SNARE coiled-coil homology domain-containing protein.
    
 0.998
VMCG_02464
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.992
VMCG_08946
t-SNARE coiled-coil homology domain-containing protein.
    
 0.985
VMCG_01738
t-SNARE coiled-coil homology domain-containing protein.
    
 0.980
VMCG_02993
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.977
VMCG_05394
Uncharacterized protein.
    
 0.970
VMCG_09380
Uncharacterized protein.
    
 0.967
VMCG_00051
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.948
Your Current Organism:
Valsa malicola
NCBI taxonomy Id: 356882
Other names: V. malicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.