STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMCG_02903Uncharacterized protein. (617 aa)    
Predicted Functional Partners:
VMCG_09675
Fe2OG dioxygenase domain-containing protein.
    
 0.727
VMCG_02482
Aamy domain-containing protein.
    
 0.727
VMCG_01041
Fe2OG dioxygenase domain-containing protein.
    
 0.727
VMCG_00646
Aamy domain-containing protein.
    
 0.727
VMCG_00408
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
    
 
 0.656
VMCG_08977
Aamy domain-containing protein.
    
 0.644
VMCG_08783
Aamy domain-containing protein.
    
 0.644
VMCG_07775
Aamy domain-containing protein.
    
 0.644
VMCG_06067
Aamy domain-containing protein.
    
 0.644
VMCG_04116
Aamy domain-containing protein.
    
 0.644
Your Current Organism:
Valsa malicola
NCBI taxonomy Id: 356882
Other names: V. malicola
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