STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMCG_02117Uncharacterized protein. (281 aa)    
Predicted Functional Partners:
VMCG_04661
Uncharacterized protein.
   
    0.827
VMCG_02356
Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.
   
    0.769
VMCG_01515
Uncharacterized protein.
   
    0.769
VMCG_10116
Uncharacterized protein.
   
    0.759
VMCG_04334
RRM domain-containing protein.
   
    0.756
VMCG_10733
Uncharacterized protein.
   
    0.742
VMCG_10099
Brix domain-containing protein.
   
   0.714
VMCG_03031
NUC153 domain-containing protein.
   
  
 0.699
VMCG_06324
NUC153 domain-containing protein.
   
    0.694
VMCG_00131
Uncharacterized protein.
   
    0.680
Your Current Organism:
Valsa malicola
NCBI taxonomy Id: 356882
Other names: V. malicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.