STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMCG_01774Uncharacterized protein. (583 aa)    
Predicted Functional Partners:
VMCG_07420
Serine/threonine-protein phosphatase.
    
  0.662
VMCG_09128
Uncharacterized protein.
    
 0.648
VMCG_07493
Uncharacterized protein.
    
 0.648
VMCG_05487
Uncharacterized protein.
    
 0.645
VMCG_09577
Uncharacterized protein.
    
  0.623
VMCG_06537
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.599
VMCG_09159
Ubiquitin-like domain-containing protein.
    
  0.594
VMCG_03291
BZIP domain-containing protein.
    
  0.594
VMCG_09875
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
  0.593
VMCG_08786
Uncharacterized protein.
    
  0.588
Your Current Organism:
Valsa malicola
NCBI taxonomy Id: 356882
Other names: V. malicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.