STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMCG_01030DH domain-containing protein. (898 aa)    
Predicted Functional Partners:
VMCG_05303
Uncharacterized protein.
    
 0.821
VMCG_00136
WD_REPEATS_REGION domain-containing protein.
    
 0.804
VMCG_08229
Uncharacterized protein.
    
 0.736
VMCG_01206
Uncharacterized protein.
    
  0.728
VMCG_09876
Uncharacterized protein.
    
 0.663
VMCG_08974
Uncharacterized protein.
    
 0.663
VMCG_08497
Uncharacterized protein.
    
 0.663
VMCG_07403
Uncharacterized protein.
    
 0.663
VMCG_05075
Uncharacterized protein.
    
 0.663
VMCG_04329
Uncharacterized protein.
    
 0.663
Your Current Organism:
Valsa malicola
NCBI taxonomy Id: 356882
Other names: V. malicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.