STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMCG_01056TRP_N domain-containing protein. (1200 aa)    
Predicted Functional Partners:
VMCG_04696
14_3_3 domain-containing protein.
  
 0.771
VMCG_03707
Response regulatory domain-containing protein.
    
 0.766
VMCG_07452
Uncharacterized protein.
   
 0.726
VMCG_09128
Uncharacterized protein.
    
 0.725
VMCG_07493
Uncharacterized protein.
    
 0.725
VMCG_06479
Uncharacterized protein.
    
 0.715
VMCG_01054
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
   
 0.697
VMCG_05493
Uncharacterized protein.
    
 0.685
VMCG_02829
Uncharacterized protein.
    
 0.685
VMCG_07400
Uncharacterized protein.
   
 0.680
Your Current Organism:
Valsa malicola
NCBI taxonomy Id: 356882
Other names: V. malicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.