STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMCG_01009ELMO domain-containing protein. (735 aa)    
Predicted Functional Partners:
VMCG_10879
Uncharacterized protein; Belongs to the DOCK family.
  
 
 0.999
VMCG_02120
Uncharacterized protein.
    
 0.955
VMCG_01206
Uncharacterized protein.
    
 0.841
VMCG_03040
Ribosomal_L7Ae domain-containing protein.
    
 0.792
VMCG_09876
Uncharacterized protein.
    
 0.759
VMCG_08497
Uncharacterized protein.
    
 0.759
VMCG_07403
Uncharacterized protein.
    
 0.759
VMCG_05075
Uncharacterized protein.
    
 0.759
VMCG_04329
Uncharacterized protein.
    
 0.759
VMCG_03962
Ubiquitin-like domain-containing protein.
    
 0.759
Your Current Organism:
Valsa malicola
NCBI taxonomy Id: 356882
Other names: V. malicola
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.