STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMCG_01332Uncharacterized protein; Belongs to the ClpA/ClpB family. (802 aa)    
Predicted Functional Partners:
VMCG_10304
ATP-dependent Clp protease proteolytic subunit.
  
 
 0.956
VMCG_00200
Uncharacterized protein; Belongs to the ClpA/ClpB family.
  
 
 
0.947
VMCG_09690
ATPase_AAA_core domain-containing protein.
   
 
  0.945
VMCG_04369
Uncharacterized protein; Belongs to the GrpE family.
  
 
 0.895
VMCG_01459
SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.
  
 
 0.868
VMCG_04536
J domain-containing protein.
   
 
 0.856
VMCG_08636
Uncharacterized protein.
   
 
 0.854
VMCG_01066
SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.
  
 
 0.828
VMCG_05274
Uncharacterized protein.
  
 
 0.820
VMCG_03471
Uncharacterized protein; Belongs to the heat shock protein 70 family.
  
 
 0.787
Your Current Organism:
Valsa malicola
NCBI taxonomy Id: 356882
Other names: V. malicola
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.