Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VMCG_00267 | VMCG_01551 | A0A423X8I1 | A0A423X6W0 | Uncharacterized protein. | Uncharacterized protein. | 0.633 |
VMCG_00267 | VMCG_09849 | A0A423X8I1 | A0A423VDR6 | Uncharacterized protein. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.860 |
VMCG_00433 | VMCG_01551 | A0A423X9P0 | A0A423X6W0 | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | Uncharacterized protein. | 0.643 |
VMCG_00433 | VMCG_02469 | A0A423X9P0 | A0A423X0R0 | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | YL1_C domain-containing protein. | 0.992 |
VMCG_00433 | VMCG_02473 | A0A423X9P0 | A0A423X1L5 | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | Uncharacterized protein; Belongs to the actin family. | 0.989 |
VMCG_00433 | VMCG_05412 | A0A423X9P0 | A0A423WJP7 | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | 0.991 |
VMCG_00433 | VMCG_07894 | A0A423X9P0 | A0A423W0K8 | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | Uncharacterized protein. | 0.541 |
VMCG_01196 | VMCG_01551 | A0A423X587 | A0A423X6W0 | Uncharacterized protein. | Uncharacterized protein. | 0.605 |
VMCG_01551 | VMCG_00267 | A0A423X6W0 | A0A423X8I1 | Uncharacterized protein. | Uncharacterized protein. | 0.633 |
VMCG_01551 | VMCG_00433 | A0A423X6W0 | A0A423X9P0 | Uncharacterized protein. | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | 0.643 |
VMCG_01551 | VMCG_01196 | A0A423X6W0 | A0A423X587 | Uncharacterized protein. | Uncharacterized protein. | 0.605 |
VMCG_01551 | VMCG_02461 | A0A423X6W0 | A0A423X0Y2 | Uncharacterized protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.827 |
VMCG_01551 | VMCG_02469 | A0A423X6W0 | A0A423X0R0 | Uncharacterized protein. | YL1_C domain-containing protein. | 0.633 |
VMCG_01551 | VMCG_02473 | A0A423X6W0 | A0A423X1L5 | Uncharacterized protein. | Uncharacterized protein; Belongs to the actin family. | 0.683 |
VMCG_01551 | VMCG_03171 | A0A423X6W0 | A0A423WXN4 | Uncharacterized protein. | Uncharacterized protein. | 0.609 |
VMCG_01551 | VMCG_05412 | A0A423X6W0 | A0A423WJP7 | Uncharacterized protein. | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | 0.667 |
VMCG_01551 | VMCG_07894 | A0A423X6W0 | A0A423W0K8 | Uncharacterized protein. | Uncharacterized protein. | 0.616 |
VMCG_01551 | VMCG_09849 | A0A423X6W0 | A0A423VDR6 | Uncharacterized protein. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.604 |
VMCG_02461 | VMCG_01551 | A0A423X0Y2 | A0A423X6W0 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Uncharacterized protein. | 0.827 |
VMCG_02469 | VMCG_00433 | A0A423X0R0 | A0A423X9P0 | YL1_C domain-containing protein. | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | 0.992 |
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