STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMCG_01551Uncharacterized protein. (372 aa)    
Predicted Functional Partners:
VMCG_02461
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.827
VMCG_02473
Uncharacterized protein; Belongs to the actin family.
    
 0.683
VMCG_05412
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.667
VMCG_00433
Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.
    
 0.643
VMCG_02469
YL1_C domain-containing protein.
    
 0.633
VMCG_00267
Uncharacterized protein.
    
 0.633
VMCG_07894
Uncharacterized protein.
    
 0.616
VMCG_03171
Uncharacterized protein.
    
  0.609
VMCG_01196
Uncharacterized protein.
    
  0.605
VMCG_09849
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.604
Your Current Organism:
Valsa malicola
NCBI taxonomy Id: 356882
Other names: V. malicola
Server load: low (12%) [HD]