Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VMCG_00362 | VMCG_00712 | A0A423X8E4 | A0A423X956 | 3'-5' exonuclease domain-containing protein. | AA_TRNA_LIGASE_II domain-containing protein; Belongs to the arginase family. | 0.986 |
VMCG_00362 | VMCG_00965 | A0A423X8E4 | A0A423X675 | 3'-5' exonuclease domain-containing protein. | ERCC4 domain-containing protein. | 0.995 |
VMCG_00362 | VMCG_01595 | A0A423X8E4 | A0A423X402 | 3'-5' exonuclease domain-containing protein. | ERCC4 domain-containing protein. | 0.928 |
VMCG_00362 | VMCG_04613 | A0A423X8E4 | A0A423WRV0 | 3'-5' exonuclease domain-containing protein. | 3'-5' exonuclease domain-containing protein. | 0.874 |
VMCG_00362 | VMCG_06943 | A0A423X8E4 | A0A423W266 | 3'-5' exonuclease domain-containing protein. | HRDC domain-containing protein. | 0.873 |
VMCG_00362 | VMCG_09583 | A0A423X8E4 | A0A423VJ94 | 3'-5' exonuclease domain-containing protein. | Uncharacterized protein. | 0.779 |
VMCG_00712 | VMCG_00362 | A0A423X956 | A0A423X8E4 | AA_TRNA_LIGASE_II domain-containing protein; Belongs to the arginase family. | 3'-5' exonuclease domain-containing protein. | 0.986 |
VMCG_00712 | VMCG_00965 | A0A423X956 | A0A423X675 | AA_TRNA_LIGASE_II domain-containing protein; Belongs to the arginase family. | ERCC4 domain-containing protein. | 0.951 |
VMCG_00712 | VMCG_01595 | A0A423X956 | A0A423X402 | AA_TRNA_LIGASE_II domain-containing protein; Belongs to the arginase family. | ERCC4 domain-containing protein. | 0.956 |
VMCG_00712 | VMCG_01640 | A0A423X956 | A0A423X3Q7 | AA_TRNA_LIGASE_II domain-containing protein; Belongs to the arginase family. | Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily. | 0.878 |
VMCG_00712 | VMCG_04490 | A0A423X956 | A0A423WRQ7 | AA_TRNA_LIGASE_II domain-containing protein; Belongs to the arginase family. | Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.816 |
VMCG_00712 | VMCG_04613 | A0A423X956 | A0A423WRV0 | AA_TRNA_LIGASE_II domain-containing protein; Belongs to the arginase family. | 3'-5' exonuclease domain-containing protein. | 0.986 |
VMCG_00712 | VMCG_06943 | A0A423X956 | A0A423W266 | AA_TRNA_LIGASE_II domain-containing protein; Belongs to the arginase family. | HRDC domain-containing protein. | 0.986 |
VMCG_00712 | VMCG_09233 | A0A423X956 | A0A423VLC9 | AA_TRNA_LIGASE_II domain-containing protein; Belongs to the arginase family. | AA_TRNA_LIGASE_II domain-containing protein. | 0.930 |
VMCG_00712 | VMCG_09583 | A0A423X956 | A0A423VJ94 | AA_TRNA_LIGASE_II domain-containing protein; Belongs to the arginase family. | Uncharacterized protein. | 0.902 |
VMCG_00712 | VMCG_10048 | A0A423X956 | A0A423VD97 | AA_TRNA_LIGASE_II domain-containing protein; Belongs to the arginase family. | Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily. | 0.959 |
VMCG_00965 | VMCG_00362 | A0A423X675 | A0A423X8E4 | ERCC4 domain-containing protein. | 3'-5' exonuclease domain-containing protein. | 0.995 |
VMCG_00965 | VMCG_00712 | A0A423X675 | A0A423X956 | ERCC4 domain-containing protein. | AA_TRNA_LIGASE_II domain-containing protein; Belongs to the arginase family. | 0.951 |
VMCG_00965 | VMCG_01595 | A0A423X675 | A0A423X402 | ERCC4 domain-containing protein. | ERCC4 domain-containing protein. | 0.972 |
VMCG_00965 | VMCG_04613 | A0A423X675 | A0A423WRV0 | ERCC4 domain-containing protein. | 3'-5' exonuclease domain-containing protein. | 0.995 |
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