STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMCG_00010Alkaline phosphatase. (578 aa)    
Predicted Functional Partners:
VMCG_05487
Uncharacterized protein.
  
 0.942
VMCG_09128
Uncharacterized protein.
  
 0.910
VMCG_07493
Uncharacterized protein.
  
 0.910
VMCG_07642
LMWPc domain-containing protein.
    
 0.824
VMCG_00020
Uncharacterized protein.
    
 0.815
VMCG_00783
TMP-TENI domain-containing protein.
   
 
 0.812
VMCG_10522
Uncharacterized protein.
    
 0.791
VMCG_10507
Uncharacterized protein; Belongs to the histidine acid phosphatase family.
     
 0.788
VMCG_02982
Uncharacterized protein.
     
 0.709
VMCG_05001
Aminotran_1_2 domain-containing protein.
     
 0.706
Your Current Organism:
Valsa malicola
NCBI taxonomy Id: 356882
Other names: V. malicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.