STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMCG_00719EXPERA domain-containing protein. (280 aa)    
Predicted Functional Partners:
VMCG_03136
Uncharacterized protein.
   
 
 0.819
VMCG_03658
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 
 0.812
VMCG_00517
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 
 0.812
VMCG_03024
FAD-binding PCMH-type domain-containing protein.
   
 0.805
VMCG_10620
Methyltransf_11 domain-containing protein.
     
 0.719
VMCG_05552
Uncharacterized protein.
   
 
 0.633
VMCG_00330
Uncharacterized protein.
   
 
 0.633
VMCG_09537
V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.
    
 
 0.615
VMCG_08922
V-type proton ATPase subunit; Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. The active enzyme consists of a catalytic V1 domain attached to an integral membrane V0 proton pore complex. This subunit is a non-integral membrane component of the membrane pore domain and is required for proper assembly of the V0 sector. Might be involved in the regulated assembly of V1 subunits onto the membrane sector or alternatively may prevent the passage of protons through V0 pores; Belongs to the V-ATPase V0D/AC39 subunit family.
    
 
 0.585
VMCG_02661
Uncharacterized protein.
    
 
 0.574
Your Current Organism:
Valsa malicola
NCBI taxonomy Id: 356882
Other names: V. malicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.