STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMG52699.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)    
Predicted Functional Partners:
AMG52700.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.948
AMG52697.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.937
AMG52701.1
Dihydroorotase; Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.899
AMG52703.1
2-dehydro-3-deoxyphosphooctonate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.893
AMG52702.1
L-seryl-tRNA selenium transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.892
AMG52704.1
Transcription antiterminator BglG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.799
AMG52096.1
4-hydroxy-2-ketovalerate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.788
DgaE
Selenocysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.786
AMG52698.1
Cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.734
AMG52696.1
Glycine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.718
Your Current Organism:
Citrobacter amalonaticus
NCBI taxonomy Id: 35703
Other names: ATCC 25405, C. amalonaticus, CCUG 4860, CECT 863, CIP 82.89, Citrobacter intermedius biogroup a, DSM 4593, LMG 7873, LMG:7873, Levinea amalonatica, NCTC 10805
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