Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMG54078.1 | AMG55337.1 | AL524_13800 | AL524_20875 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.412 |
AMG55337.1 | AMG54078.1 | AL524_20875 | AL524_13800 | DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.412 |
AMG55337.1 | AMG55338.1 | AL524_20875 | AL524_20880 | DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.933 |
AMG55337.1 | secD | AL524_20875 | AL524_20890 | DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.480 |
AMG55337.1 | secF | AL524_20875 | AL524_20885 | DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.486 |
AMG55338.1 | AMG55337.1 | AL524_20880 | AL524_20875 | Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.933 |
AMG55338.1 | secD | AL524_20880 | AL524_20890 | Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.471 |
AMG55338.1 | secF | AL524_20880 | AL524_20885 | Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.486 |
secD | AMG55337.1 | AL524_20890 | AL524_20875 | Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.480 |
secD | AMG55338.1 | AL524_20890 | AL524_20880 | Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.471 |
secD | secF | AL524_20890 | AL524_20885 | Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.999 |
secF | AMG55337.1 | AL524_20885 | AL524_20875 | Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.486 |
secF | AMG55338.1 | AL524_20885 | AL524_20880 | Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.486 |
secF | secD | AL524_20885 | AL524_20890 | Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.999 |